Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | ASC92_21910 | Not Available | Positive | 5838337 - 5839296 | 32800.2 |
| sugar abc transporter atp-binding protein | ASC92_21915 | Not Available | Positive | 5839296 - 5840093 | 28667.3 |
| serine/threonine protein kinase | ASC92_21920 | Not Available | Positive | 5840086 - 5841309 | 43303.1 |
| tricarboxylic transporter | ASC92_21925 | Not Available | Negative | 5841326 - 5842339 | 35077.1 |
| histidine kinase | ASC92_21930 | Not Available | Negative | 5842353 - 5843768 | 50724.8 |
| two-component system response regulator | ASC92_21935 | Not Available | Negative | 5843781 - 5844446 | 24747.8 |
| abc transporter substrate-binding protein | ASC92_21940 | Not Available | Negative | 5844472 - 5845482 | 35410.8 |
| 4-hydroxyphenylpyruvate dioxygenase | ASC92_21945 | Not Available | Negative | 5845555 - 5846349 | 29191.2 |
| shikimate dehydrogenase | ASC92_21950 | Not Available | Positive | 5846549 - 5847472 | 32775.6 |
| shikimate dehydrogenase | ASC92_21955 | Not Available | Positive | 5847500 - 5848333 | 29453.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
