Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| teicoplanin resistance protein vanz | ASC92_21855 | Not Available | Positive | 5829478 - 5830605 | 40624.0 |
| 2fe-2s ferredoxin | ASC92_21860 | Not Available | Positive | 5830650 - 5831003 | 12806.2 |
| alpha/beta hydrolase | ASC92_21865 | Not Available | Positive | 5831040 - 5831672 | 22038.4 |
| cytochrome c | ASC92_21870 | Not Available | Positive | 5831713 - 5832882 | 41947.9 |
| hypothetical protein | ASC92_21875 | Not Available | Positive | 5832892 - 5833077 | 6637.88 |
| 30s ribosomal protein s12 | ASC92_21880 | Not Available | Positive | 5833085 - 5833462 | 13962.1 |
| 30s ribosomal protein s7 | ASC92_21885 | Not Available | Positive | 5833613 - 5834086 | 18023.2 |
| elongation factor g | ASC92_21890 | Not Available | Positive | 5834183 - 5836282 | 77208.8 |
| hypothetical protein | ASC92_21900 | Not Available | Positive | 5836518 - 5836715 | 7185.16 |
| sugar abc transporter | ASC92_21905 | Not Available | Positive | 5837304 - 5838314 | 34365.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
