Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fmdb family transcriptional regulator | ASC92_21655 | Not Available | Positive | 5792086 - 5792427 | 11888.1 |
| alpha/beta hydrolase | ASC92_21660 | Not Available | Positive | 5792557 - 5792907 | 11903.8 |
| diguanylate cyclase | ASC92_21665 | Not Available | Negative | 5792984 - 5793688 | 24625.8 |
| abc transporter substrate-binding protein | ASC92_21670 | Not Available | Negative | 5793685 - 5794671 | 34672.4 |
| aspartate aminotransferase | ASC92_21675 | Not Available | Negative | 5794668 - 5795897 | 43856.4 |
| lysr family transcriptional regulator | ASC92_21680 | Not Available | Positive | 5796000 - 5797004 | 37433.2 |
| aspartate carbamoyltransferase | ASC92_21685 | Not Available | Positive | 5797071 - 5798366 | 47447.8 |
| beta-glucosidase | ASC92_21690 | Not Available | Negative | 5798410 - 5800692 | 81152.8 |
| aldolase | ASC92_21695 | Not Available | Negative | 5800835 - 5801602 | 28110.7 |
| phosphohydrolase | ASC92_21700 | Not Available | Negative | 5801624 - 5802220 | 22591.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
