Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase | ASC92_21455 | Not Available | Negative | 5747098 - 5748309 | 45275.9 |
| Trna-gly | Not Available | Not Available | Positive | 5748485 - 5748558 | Not Available |
| cupin | ASC92_21465 | Not Available | Positive | 5748832 - 5749815 | 37014.1 |
| hypothetical protein | ASC92_21470 | Not Available | Positive | 5749912 - 5750349 | 15776.2 |
| hypothetical protein | ASC92_21475 | Not Available | Positive | 5750476 - 5750766 | 10861.8 |
| ferritin | ASC92_21480 | Not Available | Negative | 5751221 - 5752045 | 32093.2 |
| alanine--trna ligase | ASC92_21485 | Not Available | Positive | 5752294 - 5754918 | 94503.6 |
| 2-dehydropantoate 2-reductase | ASC92_21490 | Not Available | Positive | 5754952 - 5755968 | 35662.6 |
| amino acid dehydrogenase | ASC92_21495 | Not Available | Positive | 5756022 - 5757281 | 45180.8 |
| abc transporter substrate-binding protein | ASC92_21500 | Not Available | Positive | 5757463 - 5758446 | 33624.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
