Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | ASC92_21285 | Not Available | Negative | 5711934 - 5712890 | 35206.5 |
| ygiq family radical sam protein | ASC92_21290 | Not Available | Positive | 5713032 - 5715422 | 88047.5 |
| dna-binding protein | ASC92_21295 | Not Available | Negative | 5715429 - 5716055 | 23001.2 |
| 4-oxalocrotonate tautomerase | ASC92_21300 | Not Available | Negative | 5716073 - 5716453 | 14181.0 |
| hypothetical protein | ASC92_21305 | Not Available | Positive | 5716694 - 5717611 | 31419.4 |
| hypothetical protein | ASC92_21310 | Not Available | Positive | 5717662 - 5718564 | 33393.8 |
| coa-transferase | ASC92_21315 | Not Available | Negative | 5718566 - 5719447 | 30670.8 |
| short-chain dehydrogenase | ASC92_21320 | Not Available | Positive | 5719596 - 5720498 | 32648.8 |
| hypothetical protein | ASC92_21325 | Not Available | Negative | 5720530 - 5720928 | 14665.2 |
| tat pathway signal protein | ASC92_21330 | Not Available | Negative | 5720956 - 5722824 | 67026.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
