Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cystathionine beta-lyase | ASC92_21185 | Not Available | Positive | 5696589 - 5697782 | 42984.5 |
| hypothetical protein | ASC92_21190 | Not Available | Positive | 5697909 - 5698112 | 7450.78 |
| arylesterase | ASC92_21195 | Not Available | Negative | 5698177 - 5698830 | 22823.6 |
| abc transporter | ASC92_21200 | Not Available | Positive | 5698846 - 5699556 | 25187.4 |
| ribosomal protein l7/l12 | ASC92_21205 | Not Available | Positive | 5699608 - 5700102 | 17721.5 |
| hypothetical protein | ASC92_21210 | Not Available | Positive | 5700107 - 5701090 | 36500.7 |
| 23s rrna methyltransferase | ASC92_21215 | Not Available | Positive | 5701119 - 5701865 | 26221.7 |
| fad-dependent oxidoreductase | ASC92_21220 | Not Available | Negative | 5701878 - 5703074 | 42604.8 |
| lysr family transcriptional regulator | ASC92_21225 | Not Available | Negative | 5703168 - 5703338 | 5773.28 |
| acetyltransferase | ASC92_21230 | Not Available | Positive | 5703550 - 5704071 | 18700.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
