Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | ASC92_21080 | Not Available | Positive | 5675697 - 5676695 | 36050.5 |
| segregation and condensation protein b | ASC92_21085 | Not Available | Positive | 5676824 - 5677666 | 30419.6 |
| pseudouridine synthase | ASC92_21090 | Not Available | Positive | 5677663 - 5679486 | 65201.1 |
| nucleoside diphosphate kinase | ASC92_21095 | Not Available | Positive | 5679640 - 5680065 | 15193.2 |
| 23s rrna (adenine(2503)-c2)-methyltransferase | ASC92_21100 | Not Available | Positive | 5680087 - 5681235 | 42504.2 |
| pilus assembly protein pilw | ASC92_21105 | Not Available | Positive | 5681240 - 5682094 | 31451.2 |
| hypothetical protein | ASC92_21110 | Not Available | Positive | 5682087 - 5683043 | 32655.1 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | ASC92_21115 | Not Available | Positive | 5683040 - 5684320 | 45960.3 |
| histidine--trna ligase | ASC92_21120 | Not Available | Positive | 5684336 - 5685646 | 47819.5 |
| hypothetical protein | ASC92_21125 | Not Available | Positive | 5685653 - 5686345 | 25285.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
