Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| propionate--coa ligase | ASC92_21030 | Not Available | Positive | 5662152 - 5664065 | 69357.2 |
| 2-oxoglutarate dehydrogenase subunit e1 | ASC92_21035 | Not Available | Positive | 5664244 - 5667120 | 106142.0 |
| dihydrolipoamide succinyltransferase | ASC92_21040 | Not Available | Positive | 5667176 - 5668435 | 43668.8 |
| dihydrolipoamide dehydrogenase | ASC92_21045 | Not Available | Positive | 5668454 - 5669884 | 50342.4 |
| atpase | ASC92_21050 | Not Available | Positive | 5669901 - 5671001 | 42218.9 |
| hypothetical protein | ASC92_21055 | Not Available | Positive | 5670998 - 5671651 | 24456.6 |
| serine/threonine protein phosphatase | ASC92_21060 | Not Available | Negative | 5671677 - 5672450 | 28166.9 |
| hypothetical protein | ASC92_21065 | Not Available | Positive | 5672558 - 5672761 | 7783.33 |
| helicase | ASC92_21070 | Not Available | Positive | 5672758 - 5674836 | 75401.2 |
| competence protein coml | ASC92_21075 | Not Available | Negative | 5674840 - 5675646 | 30117.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
