Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | ASC92_20980 | Not Available | Negative | 5648229 - 5648861 | 23285.3 |
| pas domain-containing sensor histidine kinase | ASC92_20985 | Not Available | Negative | 5648858 - 5651398 | 94304.2 |
| pyruvate dehydrogenase | ASC92_20990 | Not Available | Positive | 5651615 - 5654329 | 101113.0 |
| dihydrolipoamide acetyltransferase | ASC92_20995 | Not Available | Positive | 5654381 - 5656042 | 56508.0 |
| mfs transporter | ASC92_21000 | Not Available | Positive | 5656039 - 5656632 | 21807.1 |
| dihydrolipoamide dehydrogenase | ASC92_21005 | Not Available | Positive | 5656629 - 5658446 | 62832.0 |
| hydrolase nlp/p60 | ASC92_21010 | Not Available | Negative | 5658521 - 5659096 | 21019.1 |
| hypothetical protein | ASC92_21015 | Not Available | Positive | 5659338 - 5660468 | 40405.4 |
| esterase | ASC92_21020 | Not Available | Negative | 5660484 - 5661182 | 25182.0 |
| isochorismatase | ASC92_21025 | Not Available | Positive | 5661414 - 5662016 | 21987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
