Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | ASC92_20930 | Not Available | Positive | 5639145 - 5639852 | 25970.8 |
| Trna-val | Not Available | Not Available | Positive | 5639929 - 5640003 | Not Available |
| fad-dependent oxidoreductase | ASC92_20940 | Not Available | Positive | 5640365 - 5641468 | 38185.9 |
| hypothetical protein | ASC92_20945 | Not Available | Positive | 5641623 - 5641919 | 10299.4 |
| hypothetical protein | ASC92_20950 | Not Available | Positive | 5641974 - 5642699 | 26582.4 |
| dihydroorotate dehydrogenase (quinone) | ASC92_20955 | Not Available | Negative | 5642716 - 5643783 | 37439.1 |
| ribose 5-phosphate isomerase | ASC92_20960 | Not Available | Positive | 5643836 - 5644537 | 24517.7 |
| nrdh-redoxin | ASC92_20965 | Not Available | Negative | 5644566 - 5645207 | 22427.6 |
| oligopeptidase a | ASC92_20970 | Not Available | Negative | 5645238 - 5647295 | 76229.0 |
| bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase | ASC92_20975 | Not Available | Negative | 5647301 - 5648152 | 29632.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
