Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | ASC92_20880 | Not Available | Negative | 5628475 - 5629881 | 52733.9 |
| aromatic amino acid aminotransferase | ASC92_20885 | Not Available | Negative | 5630036 - 5631232 | 42609.3 |
| excinuclease abc subunit b | ASC92_20890 | Not Available | Positive | 5631338 - 5633455 | 79861.9 |
| dna-binding protein | ASC92_20895 | Not Available | Positive | 5633700 - 5634236 | 19332.5 |
| cysteine desulfurase iscs | ASC92_20900 | Not Available | Positive | 5634319 - 5635539 | 45058.1 |
| scaffolding protein | ASC92_20905 | Not Available | Positive | 5635590 - 5636009 | 14592.3 |
| iron-sulfur cluster assembly protein isca | ASC92_20910 | Not Available | Positive | 5636011 - 5636334 | 11830.1 |
| co-chaperone hscb | ASC92_20915 | Not Available | Positive | 5636398 - 5636916 | 19710.2 |
| fe-s protein assembly chaperone hsca | ASC92_20920 | Not Available | Positive | 5636922 - 5638784 | 65339.5 |
| 2fe-2s ferredoxin | ASC92_20925 | Not Available | Positive | 5638794 - 5639132 | 12412.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
