Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nipsnap family containing protein | ASC92_20775 | Not Available | Positive | 5608490 - 5608807 | 12065.4 |
| lactate transporter | ASC92_20780 | Not Available | Positive | 5608886 - 5610487 | 55795.5 |
| 3-oxoacyl-acp reductase | ASC92_20785 | Not Available | Positive | 5610519 - 5611334 | 28093.3 |
| hypothetical protein | ASC92_20790 | Not Available | Positive | 5611420 - 5611728 | 11230.4 |
| pp_05047 | ASC92_20795 | Not Available | Positive | 5611782 - 5612726 | Not Available |
| iclr family transcriptional regulator | ASC92_20800 | Not Available | Positive | 5612888 - 5613673 | 27930.5 |
| hypothetical protein | ASC92_20805 | Not Available | Negative | 5613687 - 5614355 | 23817.1 |
| tetr family transcriptional regulator | ASC92_20815 | Not Available | Positive | 5615328 - 5615942 | 22307.9 |
| gntr family transcriptional regulator | ASC92_20820 | Not Available | Negative | 5615955 - 5616590 | 23786.6 |
| methylmalonyl-coa mutase | ASC92_20825 | Not Available | Positive | 5616718 - 5618880 | 77948.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
