Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | ASC92_20595 | Not Available | Positive | 5567240 - 5567983 | 25969.2 |
| cupin | ASC92_20600 | Not Available | Positive | 5567980 - 5568510 | 18290.0 |
| hypothetical protein | ASC92_20605 | Not Available | Positive | 5568626 - 5569096 | 16344.7 |
| hypothetical protein | ASC92_20610 | Not Available | Negative | 5569122 - 5569511 | 14629.4 |
| hypothetical protein | ASC92_20615 | Not Available | Positive | 5569804 - 5570775 | 34449.8 |
| hypothetical protein | ASC92_20620 | Not Available | Positive | 5570818 - 5571468 | 23811.8 |
| lysr family transcriptional regulator | ASC92_20625 | Not Available | Negative | 5571513 - 5572430 | 33461.5 |
| hypothetical protein | ASC92_20630 | Not Available | Positive | 5572531 - 5573922 | 48615.3 |
| hypothetical protein | ASC92_20635 | Not Available | Positive | 5573919 - 5574281 | 13199.1 |
| abc transporter substrate-binding protein | ASC92_20640 | Not Available | Positive | 5574329 - 5575294 | 33633.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
