Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citryl-coa lyase | ASC92_20495 | Not Available | Positive | 5543164 - 5544012 | 29369.5 |
| hypothetical protein | ASC92_20500 | Not Available | Positive | 5544042 - 5545046 | 35540.6 |
| damage-inducible protein | ASC92_20505 | Not Available | Negative | 5545059 - 5545580 | 17752.2 |
| 3-ketoacyl-acp reductase | ASC92_20510 | Not Available | Positive | 5545856 - 5546593 | 25943.0 |
| c4-dicarboxylate transporter | ASC92_20515 | Not Available | Positive | 5546722 - 5548059 | 47324.2 |
| sodium:proton antiporter | ASC92_20520 | Not Available | Positive | 5548397 - 5550103 | 59857.4 |
| hypothetical protein | ASC92_20525 | Not Available | Negative | 5550118 - 5550522 | 14749.6 |
| hypothetical protein | ASC92_20530 | Not Available | Positive | 5550680 - 5550901 | 7914.3 |
| tonb-dependent receptor | ASC92_20535 | Not Available | Positive | 5551393 - 5553579 | 79095.4 |
| peptidase | ASC92_20540 | Not Available | Positive | 5553591 - 5555111 | 56868.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
