Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laccase | ASC92_20445 | Not Available | Positive | 5532353 - 5533114 | 26575.3 |
| poly(r)-hydroxyalkanoic acid synthase | ASC92_20450 | Not Available | Positive | 5533483 - 5535234 | 64146.1 |
| acetyl-coa acetyltransferase | ASC92_20455 | Not Available | Positive | 5535278 - 5536456 | 40173.7 |
| glutathione s-transferase | ASC92_20460 | Not Available | Negative | 5536488 - 5537120 | 23293.9 |
| s-transferase | ASC92_20465 | Not Available | Positive | 5537152 - 5538033 | 33036.1 |
| nadph-dependent fmn reductase | ASC92_20470 | Not Available | Positive | 5538030 - 5538620 | 21561.6 |
| lysr family transcriptional regulator | ASC92_20475 | Not Available | Negative | 5539060 - 5539971 | 33699.9 |
| laci family transcriptional regulator | ASC92_20480 | Not Available | Positive | 5540083 - 5541063 | 33776.1 |
| acyl-coa dehydrogenase | ASC92_20485 | Not Available | Positive | 5541074 - 5541970 | 32799.9 |
| coa-transferase | ASC92_20490 | Not Available | Positive | 5541986 - 5543167 | 42233.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
