Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | ASC92_00200 | Not Available | Negative | 46959 - 47552 | 22433.8 |
| luxr family transcriptional regulator | ASC92_00205 | Not Available | Positive | 47865 - 48611 | 26428.7 |
| histidine kinase | ASC92_00210 | Not Available | Positive | 48660 - 50462 | 65460.0 |
| rod shape-determining protein roda | ASC92_00215 | Not Available | Positive | 50495 - 51649 | 41309.1 |
| protease tldd | ASC92_00220 | Not Available | Positive | 51683 - 53143 | 51417.1 |
| hypothetical protein | ASC92_00225 | Not Available | Positive | 53189 - 53722 | 18236.4 |
| phospho-2-dehydro-3-deoxyheptonate aldolase | ASC92_00230 | Not Available | Positive | 53951 - 55069 | 40641.5 |
| hypothetical protein | ASC92_00235 | Not Available | Negative | 55066 - 55575 | 18567.1 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ASC92_00240 | Not Available | Negative | 55572 - 56975 | 49750.6 |
| hypothetical protein | ASC92_00245 | Not Available | Positive | 57086 - 57682 | 22258.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
