Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASC92_20395 | Not Available | Negative | 5523936 - 5524955 | 36889.4 |
| laci family transcriptional regulator | ASC92_20400 | Not Available | Positive | 5525081 - 5526136 | 38408.2 |
| alpha-ketoglutarate-dependent dioxygenase | ASC92_20405 | Not Available | Negative | 5526245 - 5526928 | 24209.8 |
| hypothetical protein | ASC92_20410 | Not Available | Positive | 5527091 - 5527321 | 8380.06 |
| phospholipase | ASC92_20415 | Not Available | Positive | 5527414 - 5529042 | 60053.0 |
| peptidase m23 | ASC92_20420 | Not Available | Negative | 5529139 - 5529645 | 17992.9 |
| hypothetical protein | ASC92_20425 | Not Available | Negative | 5529801 - 5530283 | 17162.0 |
| adp-ribose pyrophosphatase | ASC92_20430 | Not Available | Negative | 5530298 - 5530849 | 20982.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC92_20435 | Not Available | Negative | 5530867 - 5531568 | 25024.1 |
| maleylacetoacetate isomerase | ASC92_20440 | Not Available | Positive | 5531709 - 5532347 | 23978.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
