Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | ASC92_20345 | Not Available | Negative | 5513607 - 5514440 | 30272.4 |
| 2-dehydro-3-deoxyphosphooctonate aldolase | ASC92_20350 | Not Available | Negative | 5514451 - 5515296 | 30192.7 |
| serine protease | ASC92_20355 | Not Available | Negative | 5515362 - 5516318 | 32667.3 |
| hypothetical protein | ASC92_20360 | Not Available | Negative | 5516385 - 5518043 | 59896.1 |
| hypothetical protein | ASC92_20365 | Not Available | Positive | 5518267 - 5518533 | 9862.6 |
| hypothetical protein | ASC92_20370 | Not Available | Negative | 5518563 - 5518781 | 7776.29 |
| hypothetical protein | ASC92_20375 | Not Available | Negative | 5518849 - 5520183 | 45814.8 |
| ribulose 1,5-bisphosphate carboxylase | ASC92_20380 | Not Available | Negative | 5520180 - 5521448 | 44826.3 |
| glyoxalase | ASC92_20385 | Not Available | Negative | 5521454 - 5521993 | 20254.9 |
| abc transporter permease | ASC92_20390 | Not Available | Negative | 5522034 - 5523929 | 66382.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
