Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamine cyclotransferase | ASC92_20295 | Not Available | Negative | 5501632 - 5502312 | 24435.3 |
| dna-binding protein | ASC92_20300 | Not Available | Negative | 5502356 - 5503576 | 42865.1 |
| sam-dependent methyltransferase | ASC92_20305 | Not Available | Positive | 5503698 - 5504510 | 29299.6 |
| short-chain dehydrogenase | ASC92_20310 | Not Available | Negative | 5504549 - 5505334 | 28270.7 |
| tetr family transcriptional regulator | ASC92_20315 | Not Available | Positive | 5505469 - 5506137 | 25115.5 |
| glutamate synthase | ASC92_20320 | Not Available | Positive | 5506254 - 5508053 | 65482.5 |
| ferredoxin oxidoreductase | ASC92_20325 | Not Available | Positive | 5508050 - 5509891 | 67344.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | ASC92_20330 | Not Available | Positive | 5509888 - 5510943 | 37578.7 |
| signal transduction protein | ASC92_20335 | Not Available | Positive | 5510989 - 5511426 | 15759.4 |
| elongation factor g | ASC92_20340 | Not Available | Negative | 5511423 - 5513483 | 74167.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
