Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | ASC92_20245 | Not Available | Negative | 5490551 - 5491441 | 31349.4 |
| hydrolase | ASC92_20250 | Not Available | Negative | 5491458 - 5492285 | 29628.2 |
| abc transporter substrate-binding protein | ASC92_20255 | Not Available | Negative | 5492305 - 5493300 | 34478.8 |
| hypothetical protein | ASC92_20260 | Not Available | Negative | 5493306 - 5494289 | 33676.2 |
| protocatechuate 3,4-dioxygenase | ASC92_20265 | Not Available | Negative | 5494322 - 5495626 | 47934.2 |
| 4-hydroxybenzoate transporter | ASC92_20270 | Not Available | Negative | 5495692 - 5497047 | 46716.5 |
| 4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase | ASC92_20275 | Not Available | Negative | 5497083 - 5497784 | 24489.8 |
| 4-oxalomesaconate hydratase | ASC92_20280 | Not Available | Negative | 5497787 - 5498815 | 38451.0 |
| lysr family transcriptional regulator | ASC92_20285 | Not Available | Positive | 5499031 - 5500275 | 44738.3 |
| thioredoxin | ASC92_20290 | Not Available | Negative | 5500854 - 5501630 | 29588.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
