Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | ASC92_20195 | Not Available | Negative | 5480478 - 5481851 | 50037.7 |
| two-component system response regulator | ASC92_20200 | Not Available | Positive | 5482027 - 5482767 | 27785.8 |
| thioredoxin | ASC92_20205 | Not Available | Negative | 5483195 - 5483758 | 20840.8 |
| laci family transcriptional regulator | ASC92_20210 | Not Available | Negative | 5483911 - 5484873 | 33170.1 |
| 2-pyrone-4,6-dicarboxylate hydrolase | ASC92_20215 | Not Available | Negative | 5484897 - 5485772 | 32355.2 |
| formyl-coa transferase | ASC92_20220 | Not Available | Negative | 5485777 - 5486970 | 42843.1 |
| hypothetical protein | ASC92_20225 | Not Available | Negative | 5486997 - 5487971 | 33602.6 |
| citryl-coa lyase | ASC92_20230 | Not Available | Negative | 5488006 - 5488875 | 30816.2 |
| lysr family transcriptional regulator | ASC92_20235 | Not Available | Positive | 5488951 - 5489862 | 32869.2 |
| molybdenum abc transporter substrate-binding protein | ASC92_20240 | Not Available | Negative | 5489859 - 5490518 | 22166.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
