Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_19945 | Not Available | Negative | 5416468 - 5417091 | 22257.7 |
| hypothetical protein | ASC92_19950 | Not Available | Negative | 5417084 - 5417668 | 22254.1 |
| formate dehydrogenase family accessory protein fdhd | ASC92_19955 | Not Available | Positive | 5417776 - 5418687 | 33010.9 |
| glycogen branching protein | ASC92_19960 | Not Available | Positive | 5418955 - 5420847 | 71134.2 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | ASC92_19965 | Not Available | Positive | 5420844 - 5422886 | 77745.9 |
| alpha-amylase | ASC92_19970 | Not Available | Positive | 5422902 - 5426204 | 124361.0 |
| hypothetical protein | ASC92_19975 | Not Available | Positive | 5426238 - 5426984 | 26995.4 |
| glycogen debranching protein | ASC92_19980 | Not Available | Positive | 5426985 - 5429147 | 80705.6 |
| malto-oligosyltrehalose trehalohydrolase | ASC92_19985 | Not Available | Positive | 5429164 - 5431023 | 68179.9 |
| 4-alpha-glucanotransferase | ASC92_19990 | Not Available | Positive | 5431013 - 5436151 | 187189.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
