Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_19845 | Not Available | Positive | 5393668 - 5394435 | 26453.7 |
| oxidoreductase | ASC92_19850 | Not Available | Positive | 5394660 - 5395535 | 31063.2 |
| asp/glu/hydantoin racemase | ASC92_19855 | Not Available | Negative | 5395570 - 5396232 | 23553.4 |
| fad/nad(p)-binding oxidoreductase | ASC92_19860 | Not Available | Negative | 5396250 - 5397635 | 48976.3 |
| nad(fad)-dependent dehydrogenase | ASC92_19865 | Not Available | Negative | 5397628 - 5397936 | 10936.5 |
| fad-dependent oxidoreductase | ASC92_19870 | Not Available | Negative | 5397926 - 5399068 | 40898.6 |
| d-amino acid oxidase | ASC92_19875 | Not Available | Negative | 5399081 - 5400406 | 47244.3 |
| aldehyde dehydrogenase | ASC92_19880 | Not Available | Negative | 5400427 - 5401947 | 53609.2 |
| abc transporter | ASC92_19885 | Not Available | Negative | 5402202 - 5403704 | 52995.6 |
| tungsten abc transporter substrate-binding protein | ASC92_19890 | Not Available | Negative | 5403776 - 5404612 | 29725.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
