Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_19790 | Not Available | Negative | 5380177 - 5380638 | 16498.7 |
| carnitine dehydratase | ASC92_19795 | Not Available | Negative | 5380679 - 5381761 | 38600.6 |
| hypothetical protein | ASC92_19800 | Not Available | Negative | 5381758 - 5383317 | 55765.7 |
| 3-oxoacyl-acp reductase | ASC92_19810 | Not Available | Negative | 5385199 - 5386002 | 28236.9 |
| abc transporter permease | ASC92_19815 | Not Available | Negative | 5386005 - 5387885 | 66164.6 |
| abc transporter substrate-binding protein | ASC92_19820 | Not Available | Negative | 5387882 - 5388895 | 36876.2 |
| hypothetical protein | ASC92_19825 | Not Available | Positive | 5389098 - 5389913 | 28947.6 |
| acetyl-coa acetyltransferase | ASC92_19830 | Not Available | Positive | 5389994 - 5391163 | 41299.4 |
| acyl-coa synthetase | ASC92_19835 | Not Available | Positive | 5391205 - 5392803 | 58798.0 |
| hypothetical protein | ASC92_19840 | Not Available | Positive | 5392853 - 5393671 | 28987.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
