Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | ASC92_19740 | Not Available | Positive | 5369313 - 5370101 | 27534.4 |
| abc transporter atp-binding protein | ASC92_19745 | Not Available | Negative | 5370116 - 5370847 | 25983.8 |
| hypothetical protein | ASC92_19750 | Not Available | Negative | 5370847 - 5372628 | 62300.0 |
| abc transporter permease | ASC92_19755 | Not Available | Negative | 5372625 - 5373665 | 36203.2 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_19760 | Not Available | Positive | 5373866 - 5375026 | 40743.0 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_19765 | Not Available | Positive | 5375037 - 5376197 | 41098.7 |
| hypothetical protein | ASC92_19770 | Not Available | Positive | 5376338 - 5376943 | 22176.9 |
| hypothetical protein | ASC92_19775 | Not Available | Negative | 5376950 - 5378605 | 62393.8 |
| thiolase | ASC92_19780 | Not Available | Negative | 5378609 - 5379754 | 40535.7 |
| dna-binding protein | ASC92_19785 | Not Available | Negative | 5379751 - 5380164 | 15035.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
