Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | ASC92_19535 | Not Available | Negative | 5328370 - 5328753 | 13799.5 |
| hypothetical protein | ASC92_19540 | Not Available | Positive | 5328873 - 5329214 | 12744.5 |
| hypothetical protein | ASC92_19545 | Not Available | Negative | 5329225 - 5330436 | 44277.1 |
| hypothetical protein | ASC92_19550 | Not Available | Positive | 5330545 - 5330958 | 15111.0 |
| hydroxyacid dehydrogenase | ASC92_19555 | Not Available | Positive | 5330955 - 5332382 | 50921.0 |
| hypothetical protein | ASC92_19560 | Not Available | Positive | 5332430 - 5332735 | 11366.7 |
| rna polymerase subunit sigma-24 | ASC92_19565 | Not Available | Positive | 5332929 - 5333546 | 23330.9 |
| iron dicitrate transport regulator fecr | ASC92_19570 | Not Available | Positive | 5333543 - 5334607 | 37835.4 |
| cyclic peptide transporter | ASC92_19575 | Not Available | Negative | 5334670 - 5336361 | 61437.1 |
| iron reductase | ASC92_19580 | Not Available | Positive | 5336632 - 5337372 | 26957.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
