Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_19485 | Not Available | Negative | 5318062 - 5319018 | 34595.3 |
| adenosine deaminase | ASC92_19490 | Not Available | Positive | 5319033 - 5320196 | 43568.8 |
| abc transporter substrate-binding protein | ASC92_19495 | Not Available | Positive | 5320193 - 5321182 | 34541.2 |
| hypothetical protein | ASC92_19500 | Not Available | Negative | 5321226 - 5321666 | 16483.2 |
| o-acetylhomoserine aminocarboxypropyltransferase | ASC92_19505 | Not Available | Positive | 5321820 - 5323130 | 46288.1 |
| alpha/beta hydrolase | ASC92_19510 | Not Available | Positive | 5323391 - 5324197 | 28504.2 |
| abc transporter substrate-binding protein | ASC92_19515 | Not Available | Negative | 5324202 - 5325191 | 34087.4 |
| hypothetical protein | ASC92_19520 | Not Available | Negative | 5325204 - 5326631 | 50406.8 |
| lysr family transcriptional regulator | ASC92_19525 | Not Available | Positive | 5326745 - 5327686 | 33696.1 |
| epimerase | ASC92_19530 | Not Available | Negative | 5327696 - 5328358 | 23954.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
