Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | ASC92_19435 | Not Available | Negative | 5309504 - 5310046 | 19649.7 |
| hypothetical protein | ASC92_19440 | Not Available | Negative | 5310043 - 5310714 | 24680.3 |
| lysr family transcriptional regulator | ASC92_19445 | Not Available | Negative | 5311189 - 5312115 | 33377.0 |
| hypothetical protein | ASC92_19450 | Not Available | Positive | 5312591 - 5313166 | 20572.6 |
| radical sam protein | ASC92_19455 | Not Available | Negative | 5313224 - 5314318 | 40890.0 |
| marr family transcriptional regulator | ASC92_19460 | Not Available | Positive | 5314435 - 5315028 | 22383.7 |
| thiol-disulfide oxidoreductase | ASC92_19465 | Not Available | Positive | 5315089 - 5315511 | 14922.1 |
| methyltransferase type 11 | ASC92_19470 | Not Available | Positive | 5315544 - 5316503 | 35317.3 |
| polyketide cyclase | ASC92_19475 | Not Available | Positive | 5316546 - 5317604 | 39076.1 |
| 4,5-dioxygenase | ASC92_19480 | Not Available | Positive | 5317701 - 5318048 | 13068.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
