Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside 2-deoxyribosyltransferase | ASC92_02355 | Not Available | Positive | 516973 - 517518 | 19068.7 |
| hypothetical protein | ASC92_02360 | Not Available | Negative | 517571 - 517918 | 11428.8 |
| isocitrate dehydrogenase | ASC92_02365 | Not Available | Negative | 517942 - 520179 | 82221.9 |
| abc transporter | ASC92_02370 | Not Available | Negative | 520339 - 520971 | 22124.7 |
| hypothetical protein | ASC92_02375 | Not Available | Positive | 521047 - 521817 | 28170.3 |
| mfs transporter | ASC92_02380 | Not Available | Negative | 521824 - 523116 | 44143.3 |
| gntr family transcriptional regulator | ASC92_02385 | Not Available | Negative | 523113 - 523796 | 24341.2 |
| penicillin-binding protein 1c | ASC92_02390 | Not Available | Negative | 523938 - 526190 | 81307.6 |
| hypothetical protein | ASC92_02395 | Not Available | Positive | 526456 - 526668 | 7952.21 |
| lysine transporter lyse | ASC92_02400 | Not Available | Negative | 526738 - 527364 | 21924.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
