Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_19335 | Not Available | Negative | 5293836 - 5294807 | 35483.8 |
| (2fe-2s)-binding protein | ASC92_19340 | Not Available | Positive | 5295004 - 5295681 | 23641.2 |
| (2fe-2s)-binding protein | ASC92_19345 | Not Available | Positive | 5295692 - 5296534 | 31450.2 |
| glutathione s-transferase | ASC92_19350 | Not Available | Positive | 5296531 - 5297181 | 23680.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | ASC92_19355 | Not Available | Positive | 5297220 - 5298326 | 39530.0 |
| alpha/beta hydrolase | ASC92_19360 | Not Available | Positive | 5298347 - 5299270 | 33877.4 |
| s-formylglutathione hydrolase | ASC92_19365 | Not Available | Positive | 5299267 - 5300145 | 31658.7 |
| gcn5 family acetyltransferase | ASC92_19370 | Not Available | Positive | 5300180 - 5300683 | 19197.1 |
| glyoxalase | ASC92_19375 | Not Available | Positive | 5300709 - 5301098 | 13883.3 |
| transcriptional regulator | ASC92_19380 | Not Available | Positive | 5301095 - 5301508 | 15566.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
