Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | ASC92_19285 | Not Available | Positive | 5281810 - 5282661 | 30975.4 |
| transcriptional regulator | ASC92_19290 | Not Available | Positive | 5282838 - 5283263 | 14618.4 |
| peptidylprolyl isomerase | ASC92_19295 | Not Available | Positive | 5283348 - 5283698 | 12157.2 |
| molecular chaperone grpe | ASC92_19300 | Not Available | Positive | 5283965 - 5284504 | 19237.7 |
| fe-s protein assembly chaperone hsca | ASC92_19305 | Not Available | Positive | 5284626 - 5286563 | 69284.4 |
| molecular chaperone dnaj | ASC92_19310 | Not Available | Positive | 5286672 - 5287811 | 41153.6 |
| serine/threonine protein kinase | ASC92_19315 | Not Available | Positive | 5288477 - 5290399 | 73334.2 |
| hypothetical protein | ASC92_19320 | Not Available | Positive | 5290448 - 5291740 | 49423.6 |
| spovr family protein | ASC92_19325 | Not Available | Positive | 5291737 - 5293260 | 59301.1 |
| 3-dehydroquinate dehydratase | ASC92_19330 | Not Available | Negative | 5293363 - 5293803 | 15731.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
