Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | ASC92_19235 | Not Available | Negative | 5271147 - 5272019 | 30956.7 |
| nad-dependent dehydratase | ASC92_19240 | Not Available | Positive | 5272243 - 5273058 | 29736.2 |
| gluconolactonase | ASC92_19245 | Not Available | Positive | 5273048 - 5273938 | 31781.7 |
| c4-dicarboxylate abc transporter | ASC92_19250 | Not Available | Positive | 5273992 - 5274984 | 35966.7 |
| c4-dicarboxylate abc transporter permease | ASC92_19255 | Not Available | Positive | 5275127 - 5275621 | 17747.2 |
| hypothetical protein | ASC92_19260 | Not Available | Positive | 5275612 - 5276964 | 47934.7 |
| galactarate dehydratase | ASC92_19265 | Not Available | Positive | 5276984 - 5278564 | 55974.2 |
| abc transporter substrate-binding protein | ASC92_19270 | Not Available | Positive | 5278631 - 5279608 | 34516.8 |
| 6-phosphogluconolactonase | ASC92_19275 | Not Available | Positive | 5279618 - 5280685 | 37640.6 |
| mfs transporter | ASC92_19280 | Not Available | Positive | 5280721 - 5281716 | 34009.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
