Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_19180 | Not Available | Positive | 5256705 - 5258480 | 64377.7 |
| hypothetical protein | ASC92_19185 | Not Available | Positive | 5258477 - 5259607 | 40621.8 |
| antibiotic abc transporter permease | ASC92_19190 | Not Available | Positive | 5259619 - 5260737 | 40354.1 |
| rnd transporter | ASC92_19195 | Not Available | Positive | 5260762 - 5262288 | 54316.9 |
| glucokinase | ASC92_19200 | Not Available | Negative | 5262299 - 5263363 | 39471.7 |
| amino acid abc transporter permease | ASC92_19205 | Not Available | Positive | 5263475 - 5265028 | 54970.8 |
| glucarate dehydratase | ASC92_19215 | Not Available | Negative | 5267205 - 5268560 | 49306.9 |
| hypothetical protein | ASC92_19220 | Not Available | Negative | 5268583 - 5269032 | 15399.7 |
| 5-dehydro-4-deoxyglucarate dehydratase | ASC92_19225 | Not Available | Negative | 5269077 - 5269988 | 32327.0 |
| abc transporter substrate-binding protein | ASC92_19230 | Not Available | Negative | 5270043 - 5271032 | 34736.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
