Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_19130 | Not Available | Negative | 5246439 - 5247143 | 25226.7 |
| abc transporter atp-binding protein | ASC92_19135 | Not Available | Negative | 5247136 - 5247897 | 27270.2 |
| abc transporter permease | ASC92_19140 | Not Available | Negative | 5247894 - 5248895 | 35413.5 |
| abc transporter permease | ASC92_19145 | Not Available | Negative | 5248896 - 5249768 | 30872.2 |
| abc transporter substrate-binding protein | ASC92_19150 | Not Available | Negative | 5250092 - 5251276 | 42074.9 |
| methionine synthase | ASC92_19155 | Not Available | Positive | 5251547 - 5252668 | 41972.2 |
| glutathione s-transferase | ASC92_19160 | Not Available | Positive | 5252697 - 5253362 | 24703.8 |
| phospholipase | ASC92_19165 | Not Available | Positive | 5253409 - 5254788 | 51135.8 |
| tetr family transcriptional regulator | ASC92_19170 | Not Available | Negative | 5254766 - 5255437 | 24190.8 |
| hypothetical protein | ASC92_19175 | Not Available | Positive | 5255541 - 5256551 | 36256.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
