Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna primase | ASC92_19080 | Not Available | Positive | 5233320 - 5235347 | 73957.7 |
| rna polymerase subunit sigma | ASC92_19085 | Not Available | Positive | 5235646 - 5237982 | 86462.6 |
| multidrug transporter cfla | ASC92_19090 | Not Available | Positive | 5238073 - 5239308 | 44543.3 |
| hypothetical protein | ASC92_19095 | Not Available | Positive | 5239323 - 5240450 | 40344.2 |
| abc transporter substrate-binding protein | ASC92_19100 | Not Available | Negative | 5240575 - 5241561 | 33868.5 |
| coa-transferase | ASC92_19105 | Not Available | Negative | 5241599 - 5242807 | 43459.5 |
| 3-hydroxy-3-methylglutaryl-coa lyase | ASC92_19110 | Not Available | Negative | 5242804 - 5243751 | 33218.3 |
| lysr family transcriptional regulator | ASC92_19115 | Not Available | Positive | 5243853 - 5244755 | 32679.6 |
| mbl fold metallo-hydrolase | ASC92_19120 | Not Available | Positive | 5244896 - 5245795 | 31975.6 |
| protein-disulfide isomerase | ASC92_19125 | Not Available | Positive | 5245783 - 5246442 | 23563.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
