Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_18980 | Not Available | Positive | 5212204 - 5213148 | 34662.8 |
| peptide abc transporter atp-binding protein | ASC92_18985 | Not Available | Negative | 5213167 - 5214054 | 31045.0 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | ASC92_18990 | Not Available | Negative | 5214051 - 5214617 | 21238.8 |
| excinuclease abc subunit c | ASC92_18995 | Not Available | Negative | 5214665 - 5216629 | 72379.8 |
| gamma-glutamyltransferase | ASC92_19000 | Not Available | Positive | 5216771 - 5218819 | 70070.9 |
| peptidase m20 | ASC92_19005 | Not Available | Negative | 5218871 - 5220295 | 51796.3 |
| hypothetical protein | ASC92_19010 | Not Available | Positive | 5220371 - 5221459 | 40205.2 |
| elongation factor p | ASC92_19015 | Not Available | Positive | 5221613 - 5222167 | 20670.8 |
| 3-isopropylmalate dehydrogenase | ASC92_19020 | Not Available | Positive | 5222301 - 5223164 | 32123.4 |
| mfs transporter | ASC92_19025 | Not Available | Negative | 5223174 - 5224337 | 40471.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
