Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | ASC92_02305 | Not Available | Positive | 509713 - 510489 | 27661.1 |
| l-fucose mutarotase | ASC92_02310 | Not Available | Positive | 510519 - 510848 | 12936.5 |
| xre family transcriptional regulator | ASC92_02315 | Not Available | Positive | 510926 - 511366 | 15936.2 |
| alpha-hydroxy-acid oxidizing enzyme | ASC92_02320 | Not Available | Negative | 511451 - 512608 | 42057.9 |
| lysr family transcriptional regulator | ASC92_02325 | Not Available | Negative | 512727 - 513611 | 32878.6 |
| tetr family transcriptional regulator | ASC92_02330 | Not Available | Negative | 513661 - 514269 | 21675.2 |
| histidine kinase | ASC92_02335 | Not Available | Positive | 514355 - 514777 | 16837.5 |
| cyanate hydratase | ASC92_02340 | Not Available | Positive | 514951 - 515394 | 16582.1 |
| oxidoreductase | ASC92_02345 | Not Available | Negative | 515388 - 516146 | 26995.6 |
| hypothetical protein | ASC92_02350 | Not Available | Negative | 516299 - 516841 | 19977.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
