Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | ASC92_18880 | Not Available | Positive | 5196711 - 5197124 | 15317.5 |
| hemin transporter hemp | ASC92_18885 | Not Available | Positive | 5197218 - 5197430 | 7370.01 |
| hypothetical protein | ASC92_18890 | Not Available | Negative | 5197612 - 5198019 | 13812.6 |
| hypothetical protein | ASC92_18895 | Not Available | Positive | 5198185 - 5198886 | 24814.1 |
| 23s rrna methyltransferase | ASC92_18900 | Not Available | Negative | 5198932 - 5200380 | 53630.5 |
| rna polymerase sigma factor rpos | ASC92_18905 | Not Available | Negative | 5200411 - 5201457 | 38403.5 |
| peptidase | ASC92_18910 | Not Available | Negative | 5201462 - 5202373 | 31442.3 |
| protein-l-isoaspartate o-methyltransferase | ASC92_18915 | Not Available | Negative | 5202385 - 5203158 | 27097.3 |
| stationary phase survival protein sure | ASC92_18920 | Not Available | Negative | 5203160 - 5203918 | 26986.2 |
| nadph:quinone oxidoreductase | ASC92_18925 | Not Available | Positive | 5204046 - 5205032 | 34353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
