Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| replicative dna helicase | ASC92_18780 | Not Available | Negative | 5176584 - 5177990 | 51577.7 |
| 50s ribosomal protein l9 | ASC92_18785 | Not Available | Negative | 5178162 - 5178614 | 15763.0 |
| 30s ribosomal protein s18 | ASC92_18790 | Not Available | Negative | 5178627 - 5178908 | 11040.5 |
| single-stranded dna-binding protein | ASC92_18795 | Not Available | Negative | 5178930 - 5179244 | 11080.5 |
| 30s ribosomal protein s6 | ASC92_18800 | Not Available | Negative | 5179249 - 5179623 | 14231.1 |
| hypothetical protein | ASC92_18805 | Not Available | Negative | 5179738 - 5180214 | 16426.8 |
| phosphoenolpyruvate synthase | ASC92_18810 | Not Available | Negative | 5180380 - 5182773 | 86683.8 |
| phosphoenolpyruvate synthetase regulatory protein | ASC92_18815 | Not Available | Positive | 5182967 - 5183788 | 30876.1 |
| alkyl hydroperoxide reductase subunit f | ASC92_18820 | Not Available | Negative | 5183848 - 5185404 | 55636.8 |
| alkyl hydroperoxide reductase | ASC92_18825 | Not Available | Negative | 5185494 - 5186057 | 20599.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
