Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine synthase | ASC92_18730 | Not Available | Negative | 5167108 - 5168523 | 51696.7 |
| homoserine dehydrogenase | ASC92_18735 | Not Available | Negative | 5168520 - 5169842 | 46563.7 |
| aminotransferase | ASC92_18740 | Not Available | Negative | 5169902 - 5171134 | 45554.8 |
| hypothetical protein | ASC92_18745 | Not Available | Positive | 5171255 - 5171638 | 13681.3 |
| peroxiredoxin | ASC92_18750 | Not Available | Positive | 5171789 - 5172265 | 17610.5 |
| phosphate starvation-inducible protein phoh | ASC92_18755 | Not Available | Positive | 5172477 - 5174252 | 64150.6 |
| glyoxalase | ASC92_18760 | Not Available | Positive | 5174402 - 5174779 | 13337.9 |
| hypothetical protein | ASC92_18765 | Not Available | Positive | 5174787 - 5175236 | 16610.0 |
| transcriptional regulator | ASC92_18770 | Not Available | Positive | 5175248 - 5175697 | 16728.4 |
| dna-binding transcriptional regulator | ASC92_18775 | Not Available | Positive | 5175825 - 5176574 | 27745.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
