Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_18475 | Not Available | Positive | 5122735 - 5123814 | 39560.9 |
| mbl fold metallo-hydrolase | ASC92_18480 | Not Available | Positive | 5123820 - 5124596 | 27528.6 |
| hypothetical protein | ASC92_18485 | Not Available | Negative | 5124676 - 5124942 | 8319.91 |
| hypothetical protein | ASC92_18490 | Not Available | Negative | 5125036 - 5125539 | 18711.0 |
| cupin | ASC92_18495 | Not Available | Negative | 5125529 - 5126671 | 41977.4 |
| peptidylprolyl isomerase | ASC92_18500 | Not Available | Positive | 5126686 - 5127210 | 18870.3 |
| hypothetical protein | ASC92_18505 | Not Available | Negative | 5127284 - 5127784 | 17329.5 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | ASC92_18510 | Not Available | Negative | 5127968 - 5128414 | 15882.3 |
| hypothetical protein | ASC92_18515 | Not Available | Negative | 5128411 - 5128878 | 16703.4 |
| phosphopantothenate synthase | ASC92_18520 | Not Available | Negative | 5128878 - 5130101 | 43674.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
