Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase | ASC92_18425 | Not Available | Negative | 5110167 - 5110697 | 19220.5 |
| hypothetical protein | ASC92_18430 | Not Available | Negative | 5110720 - 5112312 | 58333.0 |
| mbl fold metallo-hydrolase | ASC92_18435 | Not Available | Positive | 5112770 - 5113891 | 41347.7 |
| hypothetical protein | ASC92_18440 | Not Available | Negative | 5113899 - 5114090 | 7129.76 |
| dna topoisomerase iv subunit a | ASC92_18445 | Not Available | Negative | 5114090 - 5116492 | 86416.4 |
| lytic transglycosylase | ASC92_18450 | Not Available | Negative | 5116566 - 5117486 | 32335.8 |
| dna topoisomerase iv subunit b | ASC92_18455 | Not Available | Negative | 5117501 - 5119498 | 72365.4 |
| mfs transporter | ASC92_18460 | Not Available | Positive | 5119681 - 5120907 | 43316.8 |
| sam-dependent methyltransferase | ASC92_18465 | Not Available | Positive | 5121080 - 5121649 | 19872.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ASC92_18470 | Not Available | Positive | 5121770 - 5122618 | 30325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
