Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_18225 | Not Available | Positive | 5062478 - 5063455 | 35659.2 |
| transglutaminase | ASC92_18230 | Not Available | Positive | 5063469 - 5065490 | 74323.1 |
| lytic transglycosylase | ASC92_18235 | Not Available | Positive | 5065544 - 5066644 | 39743.3 |
| n-methyl-d-aspartate receptor nmdar2c subunit | ASC92_18240 | Not Available | Positive | 5066649 - 5067269 | 23456.6 |
| hypothetical protein | ASC92_18245 | Not Available | Negative | 5067279 - 5067770 | 18003.6 |
| beta-ketoacyl synthase | ASC92_18250 | Not Available | Negative | 5067767 - 5068837 | 36710.9 |
| acyl carrier protein | ASC92_18255 | Not Available | Negative | 5068834 - 5069064 | 8216.86 |
| abc transporter | ASC92_18260 | Not Available | Negative | 5069106 - 5070263 | 41304.8 |
| abc transporter | ASC92_18265 | Not Available | Negative | 5070271 - 5071179 | 32384.3 |
| peptidase | ASC92_18270 | Not Available | Negative | 5071510 - 5072490 | 36059.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
