Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pkhd-type hydroxylase | ASC92_18115 | Not Available | Positive | 5038724 - 5039410 | 24969.7 |
| l-rhamnonate dehydratase | ASC92_18125 | Not Available | Negative | 5040395 - 5041582 | 44025.9 |
| mfs transporter | ASC92_18130 | Not Available | Negative | 5041622 - 5042932 | 46643.8 |
| 3-oxoacyl-acp reductase | ASC92_18135 | Not Available | Negative | 5042986 - 5043747 | 26168.2 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC92_18140 | Not Available | Negative | 5043744 - 5044601 | 30510.6 |
| lysr family transcriptional regulator | ASC92_18145 | Not Available | Positive | 5044688 - 5045644 | 34807.3 |
| arsr family transcriptional regulator | ASC92_18150 | Not Available | Positive | 5045746 - 5046324 | 22069.7 |
| cytochrome bd biosynthesis protein | ASC92_18155 | Not Available | Negative | 5046560 - 5046709 | 5772.03 |
| cytochrome d ubiquinol oxidase subunit 2 | ASC92_18160 | Not Available | Negative | 5046725 - 5047879 | 41408.1 |
| cytochrome d terminal oxidase subunit 1 | ASC92_18165 | Not Available | Negative | 5047876 - 5049486 | 58691.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
