Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | ASC92_18005 | Not Available | Negative | 5008909 - 5009862 | 34427.9 |
| dehydrogenase | ASC92_18010 | Not Available | Negative | 5009868 - 5010755 | 31213.9 |
| lysr family transcriptional regulator | ASC92_18015 | Not Available | Positive | 5010884 - 5011777 | 33635.0 |
| nipsnap domain containing protein | ASC92_18020 | Not Available | Positive | 5012047 - 5012361 | 11753.2 |
| dioxygenase | ASC92_18025 | Not Available | Positive | 5012371 - 5013294 | 34045.4 |
| hypothetical protein | ASC92_18030 | Not Available | Positive | 5013294 - 5013674 | 13624.6 |
| abc transporter substrate-binding protein | ASC92_18035 | Not Available | Positive | 5013710 - 5014879 | 41084.4 |
| hypothetical protein | ASC92_18040 | Not Available | Positive | 5015115 - 5016233 | 38643.4 |
| diguanylate cyclase | ASC92_18045 | Not Available | Negative | 5017557 - 5019089 | 55376.2 |
| hypothetical protein | ASC92_18055 | Not Available | Negative | 5020167 - 5020559 | 14969.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
