Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion system protein | ASC92_17525 | Not Available | Positive | 4885922 - 4886938 | 36574.1 |
| secretion system protein | ASC92_17530 | Not Available | Positive | 4886935 - 4887900 | 35096.2 |
| hypothetical protein | ASC92_17535 | Not Available | Positive | 4887897 - 4888835 | 33078.4 |
| hypothetical protein | ASC92_17540 | Not Available | Positive | 4888832 - 4889266 | 14851.4 |
| pilus assembly protein tade | ASC92_17545 | Not Available | Positive | 4889298 - 4889771 | 17177.9 |
| pilus assembly protein tadg | ASC92_17550 | Not Available | Positive | 4889837 - 4890268 | 15338.4 |
| fis family transcriptional regulator | ASC92_17555 | Not Available | Positive | 4892125 - 4893543 | 51868.0 |
| transporter | ASC92_17560 | Not Available | Negative | 4893548 - 4895119 | 57025.3 |
| secretion protein hyld | ASC92_17565 | Not Available | Negative | 4895116 - 4896432 | 48078.4 |
| abc transporter | ASC92_17570 | Not Available | Negative | 4896478 - 4898295 | 65469.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
