Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyquinol 1,2-dioxygenase | ASC92_17475 | Not Available | Negative | 4874378 - 4875385 | 37883.5 |
| hydroxyquinol 1,2-dioxygenase | ASC92_17480 | Not Available | Negative | 4875412 - 4875924 | 18890.4 |
| lysr family transcriptional regulator | ASC92_17485 | Not Available | Negative | 4876058 - 4877020 | 35534.0 |
| hypothetical protein | ASC92_17490 | Not Available | Positive | 4877151 - 4878251 | 38496.6 |
| hypothetical protein | ASC92_17495 | Not Available | Positive | 4878218 - 4879675 | 52817.9 |
| peptidase a24 | ASC92_17500 | Not Available | Positive | 4880298 - 4880789 | 17037.1 |
| pilus assembly protein cpab | ASC92_17505 | Not Available | Positive | 4880871 - 4881863 | 34397.8 |
| hypothetical protein | ASC92_17510 | Not Available | Positive | 4881903 - 4883291 | 48750.3 |
| histidine kinase | ASC92_17515 | Not Available | Positive | 4883337 - 4884620 | 45607.7 |
| pilus assembly protein cpaf | ASC92_17520 | Not Available | Positive | 4884625 - 4885944 | 48810.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
