Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipate coa-transferase | ASC92_17425 | Not Available | Negative | 4864410 - 4865057 | 22840.6 |
| 3-oxoadipate coa-transferase | ASC92_17430 | Not Available | Negative | 4865054 - 4865755 | 24629.7 |
| iclr family transcriptional regulator | ASC92_17435 | Not Available | Positive | 4865885 - 4866670 | 28254.4 |
| receptor | ASC92_17440 | Not Available | Negative | 4866795 - 4867802 | 34322.9 |
| abc transporter permease | ASC92_17445 | Not Available | Negative | 4867951 - 4868973 | 36536.3 |
| abc transporter permease | ASC92_17450 | Not Available | Negative | 4868979 - 4869842 | 29981.5 |
| abc transporter atp-binding protein | ASC92_17455 | Not Available | Negative | 4869835 - 4870551 | 25635.3 |
| abc transporter atp-binding protein | ASC92_17460 | Not Available | Negative | 4870715 - 4871434 | 25969.6 |
| abc transporter substrate-binding protein | ASC92_17465 | Not Available | Negative | 4871447 - 4872700 | 44530.1 |
| betaine-aldehyde dehydrogenase | ASC92_17470 | Not Available | Negative | 4872756 - 4874219 | 52543.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
