Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna ligase | ASC92_17375 | Not Available | Negative | 4853749 - 4854972 | 44533.4 |
| rna-binding protein | ASC92_17380 | Not Available | Negative | 4855765 - 4857318 | 55710.4 |
| transcriptional regulator | ASC92_17385 | Not Available | Positive | 4857533 - 4859140 | 59461.0 |
| hypothetical protein | ASC92_17390 | Not Available | Positive | 4859157 - 4859687 | 18711.5 |
| alpha/beta hydrolase | ASC92_17395 | Not Available | Positive | 4859684 - 4860544 | 31719.7 |
| ornithine cyclodeaminase | ASC92_17400 | Not Available | Positive | 4860553 - 4861500 | 33469.8 |
| hypothetical protein | ASC92_17405 | Not Available | Positive | 4861634 - 4861864 | 8320.04 |
| transcriptional regulator | ASC92_17410 | Not Available | Negative | 4861897 - 4862499 | 21897.1 |
| damage-inducible protein dinb | ASC92_17415 | Not Available | Positive | 4862602 - 4863114 | 18800.2 |
| beta-ketoadipyl coa thiolase | ASC92_17420 | Not Available | Negative | 4863157 - 4864362 | 41735.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
