Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 479221 - 482112 | Not Available |
| 3-hydroxyacyl-coa dehydrogenase | ASC92_02165 | Not Available | Positive | 480144 - 481049 | 31757.9 |
| lysr family transcriptional regulator | ASC92_02170 | Not Available | Positive | 481129 - 482019 | 32350.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 482232 - 482344 | Not Available |
| 2-methylcitrate dehydratase | ASC92_02175 | Not Available | Negative | 482083 - 483450 | 48482.6 |
| acyl-coa dehydrogenase | ASC92_02180 | Not Available | Negative | 483447 - 484610 | 43001.6 |
| citrate synthase | ASC92_02185 | Not Available | Negative | 484624 - 485406 | 27839.8 |
| acyl-coa dehydrogenase | ASC92_02190 | Not Available | Positive | 485514 - 487841 | 83739.8 |
| transposase | ASC92_02195 | Not Available | Negative | 487892 - 488842 | 34104.9 |
| abc transporter substrate-binding protein | ASC92_02200 | Not Available | Positive | 489075 - 490061 | 34306.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
